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• Tutorial [PDF]
• Data examples
• HTS-Net paper supplementary data
• Source code

HTS-Net Data Examples

This pages propose several dataset (publicly available) readily formatted to be used with HTS-Net as test examples. A tutorial is available here.

• Chia et al. A genome-wide RNAi screen reveals determinants of human embryonic stem cell identity. Nature 468, 316–320.
  • Fav Dataset: chia-screen-data-Fav.txt
  • Nav Dataset: chia-screen-data-Nav.txt
• Wolf el al. A mammosphere formation RNAi screen reveals that ATG4A promotes a breast cancer stem-like phenotype. Breast Cancer Res. 2013 Nov 14;15(6):R109.
  • Wolf Dataset: wolf-screen-data.txt
• Tai el al. A Functional Genomic Screen Identifies Cellular Cofactors of Hepatitis C Virus Replication. Cell Host Microbe. 5 298-307.
  • Tai Dataset: tai-screen-luciferase.txt